Yes in iiit hyderabad you can get admission using jee main rank as well as ugee which is conducted by iiit hyderabad itself but ugee is for 5yr programs and by jee main you get admission in 4yr programms

The UGEE mode is for admission to dual degree programmes. Graduates of the dual degree programmes earn two degrees: B.Tech and MS. The Masters degree requires completion of a research thesis. The programme prepares students for research-oriented jobs and higher studies. The duration of the programme is 5-years.

eligibility is class 12 or equivalent with 60% aggregate in pcm and the exam is held in two stages written  and interview on qualifying the two you get admission here more info is available on iiit hyderabad official website